搜索页_Differential+RNA-seq

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在“Elsevier电子期刊”中，命中：1,161条，耗时：0.068999 秒

在所有数据库中总计命中：2,477条

1.A joint-L_2,1-norm-constraint-based semi-supervised feature extraction for RNA-Seq data analysis

作者：Jin-Xing Liu^a ; ^b ; ^{sdcavell@126.com}Author Vitae ; Dong Wang^a ; ^{dongwshark@126.com}Author Vitae ; Ying-Lian Gao^c ; ^{yinliangao@126.com}Author Vitae ; Chun-Hou Zheng^d ; ^{zhengch99@126.com}Author Vitae ; Jun-Liang Shang^a ; ^{shangjunliang110@163.com}Author Vitae ; Feng Liu^e ; ^{feng.liu@szu.edu.cn}Author Vitae ; Yong Xu^b ; ^{yongxu@ymail.com}Author Vitae

关键词：Feature extraction ; L2 ; 1-norm constraint ; Spectral regression ; Semi-supervised method ; RNA-Seq data analysis

刊名：Neurocomputing

出版年：2017

2.RNA-seq analysis of Brachypodium distachyon responses to Barley stripe mosaic virus infection

作者：Guoxin Wang^a ; Ling Wang^a ; ^b ; Yu Cui^a ; ^c ; Meihua Yu^a ; Chen Dang^a ; Hao Wang^a ; Xuejiao Jin^a ; Lijie Yan^a ; Qiuhong Wu^d ; Dawei Li^a ; Zhiyong Liu^a ; ^d ; ^{zyliu@genetics.ac.cn}

关键词：Barley stripe mosaic virus ; Brachypodium distachyon ; BSMV ; DEGs ; RNA-seq ; Virus resistance

刊名：The Crop Journal

出版年：2017

3.Complementarity of SOMAscan to LC-MS/MS and RNA-seq for quantitative profiling of human embryonic and mesenchymal stem cells

关键词：ESC ; embryonic stem cells ; ESC-MSC ; embryonic stem cell-derived mesenchymal stem cells ; BM-MSC ; bone marrow-derived mesenchymal stem cells ; SOMA ; SOMAscan assay ; a trademark by SomaLogic ; Boulder CO ; RNA ; RNA sequencing ; PROT ; liquid chromatography coupled to mass spectrometry-based proteomics ; SDEs ; significant differentially expressed

刊名：Journal of Proteomics

出版年：2017

4.Wnt signaling promotes hindgut fate commitment through regulating multi-lineage genes during hESC differentiation

作者：Xiujuan Zhang^a ; ^b ; Ying Chen^a ; Ying Ye^a ; Jianfeng Wang^c ; Hong Wang^a ; Guohong Yuan^a ; Zhe Lin^d ; Yihui Wu^a ; Yan Zhang^a ; Xinhua Lin^a ; ^e ; ^f ; ^{xinhua.lin@ioz.ac.cn} ; ^{xinhua.lin@cchmc.org}

关键词：hESC ; human embryonic stem cell ; RNA-seq ; deep-transcriptome sequencing ; ChIP-seq ; chromatin immunoprecipitation and deep sequencing ; IPA ; Ingenuity Pathway Analysis ; DE ; definitive endoderm ; GO ; gene ontology ; RA ; Retinoic Acid ; Hh ; Hedgehog ; DAVID ; the Database for Annotation ; Visualization ; and Integrated Discovery ; 2D ; two-dimensional ; 3D ; three-dimensional ; DETs ; differentially expressed transcripts ; FW ; FGF4 ; + ; Wnt3a ; FD ; FGF4 ; + ; Dkk1 ; TSS ; transcription start site

刊名：Cellular Signalling

出版年：2017

5.Transcriptome inference and systems approaches to polypharmacology and drug discovery in herbal medicine

作者：Peng Li^a ; ^{lipengcuc@163.com} ; Jianxin Chen^b ; Wuxia Zhang^a ; Bangze Fu^b ; Wei Wang^b ; ^{wangwei@bucm.edu.cn}

关键词：Herbal medicine ; Polypharmacological effects ; RNA-seq ; Transcriptome-based inference method ; Target identification

刊名：Journal of Ethnopharmacology

出版年：2017

6.Global transcriptome analysis of Halolamina sp. to decipher the salt tolerance in extremely halophilic archaea

作者：Aslıhan Kurt-Kızıldoğan^a ; Bü ; şra Abanoz^a ; Sezer Okay^b ; ^{sezerokay@gmail.com}

关键词：ABC ; ATP-binding cassette ; Cas ; CRISPR-associated protein ; COGs ; Cluster of Orthologous Groups ; CRISPR ; Clustered regularly interspaced short palindromic repeats ; DEG ; Differentially expressed gene ; GO ; Gene Ontology ; KEGG ; Kyoto Encyclopedia of Genes and Genomes ; NR ; Non-redundant ; NT ; Nucleotide database ; qRT-PCR ; Quantitative real time polymerase chain reaction ; RNA-seq ; RNA sequencing

刊名：Gene

出版年：2017

7.Comparative analysis of TCDD-induced AhR-mediated gene expression in human, mouse and rat primary B cells

作者：Natalia Kovalova^a ; ^b ; ^{kovalova@msu.edu} ; Rance Nault^b ; ^c ; ^{naultran@msu.edu} ; Robert Crawford^b ; ^{crawfo28@msu.edu} ; Timothy R. Zacharewski^b ; ^c ; ^{tzachare@msu.edu} ; Norbert E. Kaminski^a ; ^b ; ^{kamins11@msu.edu}

关键词：TCDD ; 237 ; 8-tetrachlorodibenzo-p-dioxin ; AhR ; aryl hydrocarbon receptor ; RNA-Seq ; RNA sequencing ; IgM ; immunoglobulin M ; AFC ; antibody forming cells ; PWM ; Pokeweed mitogen ; PAS ; Per-Arnt-Sim ; PBMCs ; peripheral blood mononuclear cells ; ARNT ; AhR nuclear translocator ; DREs ; dioxin response elements ; DMSO ; dimethyl sulfoxide ; GEO ; Gene Expression Omnibus ; VST ; variance stabilizing transformation ; DAVID ; Database for Annotation ; Visualization and Integrated Discovery ; GO ; gene ontology

刊名：Toxicology and Applied Pharmacology

出版年：2017

8.Test of Small RNA Sequencing Repeatability in Rice

作者：Sun Hong-zheng ; Peng Ting ; Zhang Jing ; Li Jun-zhou ; Du Yan-xiu ; ^{dumatt@163.com} ; Zhao Quan-zhi ; ^{qzzhaoh@126.com}

关键词：rice ; deep sequencing ; small RNA ; differential expression ; random drift

刊名：Rice Science

出版年：2017

9.Effect of different early weaning regimens for calves on adipogenic gene expression in Hanwoo loin at the fattening stage

作者：Kondreddy Eswar Reddy^a ; ¹ ; JinYoung Jeong^a ; ¹ ; Sung Dae Lee^a ; Youl-Chang Baek^a ; YoungKyun Oh^a ; Minseok Kim^a ; Kyung Min So^a ; Dong Woon Kim^a ; Jae Hwan Kim^a ; Sungkwon Park^b ; ^{sungkwonpark@hotmail.com} ; Hyun-Jeong Lee^a ; ^{hyunj68@korea.kr}

关键词：Early weaning ; RNA-seq ; DEGs ; Metabolic imprinting ; Pathway

刊名：Livestock Science

出版年：2017

10.A Comprehensive Analysis of Cell Type-Specific Nuclear RNA From Neurons and Glia of the Brain

作者：Adarsh S. Reddy^a ; ¹ ; David O&rsquo ; Brien^a ; ^b ; ^{jdougherty@genetics.wustl.edu} ; Nilambari Pisat^a ; ^b ; Claire T. Weichselbaum^a ; ^b ; Kristina Sakers^a ; ^b ; Miriam Lisci^a ; ^b ; Jasbir S. Dalal^a ; ^b ; Joseph D. Dougherty^a ; ^b ;

关键词：Circular RNA ; Hnrnpu ; lincRNA ; Mirg1 ; ncRNA ; Nuclear

刊名：Biological Psychiatry

出版年：2017

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