作者：Xin Wang (1) (2)
Adrian M. Dubuc (1) (2)
Vijay Ramaswamy (1) (2) (3)
Stephen Mack (1) (2)
Deena M. A. Gendoo (4)
Marc Remke (1) (2)
Xiaochong Wu (1)
Livia Garzia (1)
Betty Luu (1)
Florence Cavalli (1)
John Peacock (1) (2)
Borja L贸pez (1)
Patryk Skowron (1) (2)
David Zagzag (5)
David Lyden (6)
Caitlin Hoffman (1) (7)
Yoon-Jae Cho (8)
Charles Eberhart (9)
Tobey MacDonald (10)
Xiao-Nan Li (11)
Timothy Van Meter (12)
Paul A. Northcott (13)
Benjamin Haibe-Kains (14) (4)
Cynthia Hawkins (15)
James T. Rutka (7)
Eric Bouffet (3)
Stefan M. Pfister (13)
Andrey Korshunov (16)
Michael D. Taylor (1) (7)

1. Developmental and Stem Cell Biology Program ; The Hospital for Sick Children ; University of Toronto ; Toronto ; ON ; Canada
2. Department of Laboratory Medicine and Pathobiology ; University of Toronto ; Toronto ; ON ; Canada
3. Division of Haematology/Oncology ; Hospital for Sick Children ; Toronto ; ON ; Canada
4. Bioinformatics and Computational Genomics Laboratory ; Princess Margaret Cancer Centre ; University Health Network ; Toronto ; ON ; Canada
5. Departments of Pathology and Neurosurgery ; NYU Langone Medical Center ; New York ; NY ; USA
6. Departments of Pediatrics ; Cell and Developmental Biology ; Weill Medical College of Cornell University ; New York ; NY ; USA
7. Division of Neurosurgery ; Hospital for Sick Children ; 555 University Ave ; Ste 1503 ; Toronto ; ON ; M5C 1X8 ; Canada
8. Department of Neurology and Neurological Sciences ; Stanford University School of Medicine ; Stanford ; CA ; USA
9. Departments of Pathology ; Ophthalmology and Oncology ; John Hopkins University School of Medicine ; Baltimore ; MD ; USA
10. Pediatric Neuro-Oncology Program ; Emory University School of Medicine ; Atlanta ; GA ; USA
11. Department of Pediatrics ; Brain Tumor Program ; Children鈥檚 Cancer Center ; Baylor College of Medicine ; Houston ; TX ; USA
12. Department of Pediatrics ; Virginia Commonwealth University School of Medicine ; Richmond ; VA ; USA
13. Division of Pediatric Neurooncology ; Department of Pediatric Hematology and Oncology ; German Cancer Consortium (DKTK) ; German Cancer Research Center (DKFZ) ; Heidelberg University Hospital ; Heidelberg ; Germany
14. Department of Medical Biophysics ; University of Toronto ; Toronto ; ON ; Canada
15. Department of Pathology ; Hospital for Sick Children ; Toronto ; ON ; Canada
16. Clinical Cooperation Unit Neuropathology ; German Cancer Research Center (DKFZ) ; Heidelberg ; Germany

关键词：Medulloblastoma ; Metastasis ; Molecular subgroups ; Integrative genomics ; Gene expression ; DNA methylation

刊名：Acta Neuropathologica

出版年：2015

作者：Irma N. Ramos (1) (4)
Savitri N. Appana (2) (4)
Guy Brock (2) (4)
Ted Kalbfleisch (3) (4)
Qiang He (4)
Kenneth S. Ramos (3) (4)

1. Department of Environmental and Occupational Health Sciences ; School of Public Health and Information Sciences ; University of Louisville ; Louisville ; KY ; 40202 ; USA
4. Center for Environmental Genomics and Integrative Biology ; University of Louisville ; Louisville ; KY ; 40202 ; USA
2. Department of Bioinformatics and Biostatistics ; University of Louisville ; Louisville ; KY ; 40202 ; USA
3. Department of Biochemistry and Molecular Biology ; University of Louisville ; Louisville ; KY ; 40202 ; USA

关键词：Community health ; Hispanic health ; Risk factors of disease ; Rural Kentucky ; Community health workers

刊名：Journal of Immigrant and Minority Health

出版年：2015

作者：Eric F Lock (1) (2)
Karen L Soldano (1) (3)
Melanie E Garrett (1) (3)
Heidi Cope (1) (3)
Christina A Markunas (1)
Herbert Fuchs (4)
Gerald Grant (4) (5)
David B Dunson (2)
Simon G Gregory (1) (6)
Allison E Ashley-Koch (1) (3)

1. Department of Medicine ; Duke University Medical Center ; Durham ; NC ; USA
2. Department of Statistical Science ; Duke University ; Durham ; NC ; USA
3. Duke Center for Human Disease Modeling ; Duke University Medical Center ; Durham ; NC ; USA
4. Division of Neurosurgery ; Department of Surgery ; Duke University Medical Center ; Durham ; NC ; USA
5. Department of Neurosurgery ; Stanford University/Lucile Packard Children鈥檚 Hospital ; Stanford ; CA ; USA
6. Duke Molecular Physiology Institute ; Duke University Medical Center ; Durham ; NC ; USA

关键词：eQTL analysis ; Multi ; tissue integration ; Chiari Type I Malformation ; Dura mater ; Whole genome expression

刊名：BMC Genomics

出版年：2015

作者：Tamaki Kato (1)
Elena Crestani (2)
Chikako Kamae (1)
Kenichi Honma (1)
Tomoko Yokosuka (3)
Takeshi Ikegawa (4)
Naonori Nishida (5)
Hirokazu Kanegane (5) (6)
Taizo Wada (7)
Akihiro Yachie (7)
Osamu Ohara (8) (9)
Tomohiro Morio (6)
Luigi D. Notarangelo (2)
Kohsuke Imai (1) (6)
Shigeaki Nonoyama (1)

1. Department of Pediatrics ; National Defense Medical College ; Tokorozawa ; Saitama ; Japan
2. Division of Immunology ; Children鈥檚 Hospital Boston ; Harvard Medical School ; Boston ; MA ; USA
3. Department of Hemato-oncology/Regeneration Medicine ; Kanagawa Children鈥檚 Medical Center ; Yokohama ; Kanagawa ; Japan
4. Department of Pediatrics ; Yokohama Rosai Hospital ; Yokohama ; Kanagawa ; Japan
5. Department of Pediatrics ; University of Toyama ; Toyama ; Japan
6. Department of Pediatrics ; Tokyo Medical and Dental University (TMDU) ; 1-5-45 ; Yushima ; Bunkyo-ku ; Tokyo ; 113-8519 ; Japan
7. Department of Pediatrics ; Kanazawa University ; Kanazawa ; Ishikawa ; Japan
8. Laboratory for Integrative Genomics ; RIKEN Center for Integrative Medical Sciences ; Yokohama ; Kanagawa ; Japan
9. Department of Technology Development ; Kazusa DNA Research Institute ; Kisarazu ; Chiba ; Japan

关键词：RAG1 deficiency ; IgA deficiency ; TRECs ; KRECs ; primary immunodeficiency ; V(D)J recombination

刊名：Journal of Clinical Immunology

出版年：2015

作者：Sunjin Moon (1) (12) (2)
Tae-Hun Kim (3)
Kyung-Tai Lee (3)
Woori Kwak (4) (5)
Taeheon Lee (1)
Si-Woo Lee (3)
Myung-Jick Kim (6)
Kyuho Cho (7)
Namshin Kim (8)
Won-Hyong Chung (8)
Samsun Sung (5)
Taesung Park (9)
Seoae Cho (5)
Martien AM Groenen (10)
Rasmus Nielsen (11)
Yuseob Kim (2)
Heebal Kim (1) (4) (5)

1. Department of Agricultural biotechnology ; Seoul National University ; Seoul ; 151-921 ; Republic of Korea
12. Current address ; Department of Genome Sciences ; University of Washington ; Seattle ; WA ; USA
2. Department of Life Science and Division of EcoScience ; Ewha Womans University ; Seoul ; 120-750 ; Republic of Korea
3. Animal Genomics and Bioinformatics Division ; National Institute of Animal Science ; Rural Development Administration ; Suwon ; 441-706 ; Republic of Korea
4. Interdisciplinary Program in Bioinformatics ; Seoul National University ; Seoul ; 151-747 ; Republic of Korea
5. C&K Genomics ; Seoul National University Research Park ; Seoul ; 151-919 ; Republic of Korea
6. Animal Genetic Resources Station ; National Institute of Animal Science ; Rural Development Administration ; Suwon ; 441-706 ; Republic of Korea
7. Swine Science Division ; National Institute of Animal Science ; Rural Development Administration ; Suwon ; 441-706 ; Republic of Korea
8. Korean Bioinformation Center ; Korea Research Institute of Bioscience and Biotechnology ; Daejeon ; 305-806 ; Republic of Korea
9. Department of Statistics ; Seoul National University ; Seoul ; Republic of Korea
10. Animal Breeding and Genomics Centre ; Wageningen University ; De Elst 1 ; 6708 WD ; Wageningen ; The Netherlands
11. Department of Integrative Biology and Department of Statistics ; University of California Berkeley ; Berkeley ; CA ; 94820 ; USA

关键词：Pig ; Domestication ; Selective sweep ; Directional selection ; Quantitative traits

刊名：BMC Genomics

出版年：2015

作者：Anna Sheydina (49) (50)
Ruth Y Eberhardt (51) (52)
Daniel J Rigden (53)
Yuanyuan Chang (49) (50)
Zhanwen Li (50)
Christian C Zmasek (50)
Herbert L Axelrod (49) (54)
Adam Godzik (49) (50) (55)

49. Joint Center for Structural Genomics ; 10550 North Torrey Pines Road ; BCC-206 ; La Jolla ; California ; 92037 ; USA
50. Bioinformatics and Systems Biology Program ; Sanford-Burnham Medical Research Institute ; La Jolla ; CA ; 92037 ; USA
51. Wellcome Trust Sanger Institute ; Wellcome Trust Genome Campus ; Hinxton ; Cambridgeshire ; CB10 1SA ; UK
52. European Molecular Biology Laboratory ; European Bioinformatics Institute ; Wellcome Trust Genome Campus ; Hinxton ; Cambridgeshire ; CB10 1SD ; UK
53. Institute of Integrative Biology ; University of Liverpool ; Crown Street ; Liverpool ; L69 7ZB ; UK
54. Stanford Synchrotron Radiation Lightsource ; Menlo Park ; CA ; 94025 ; USA
55. Center for Research in Biological Systems ; University of California ; 9500 Gilman Dr ; La Jolla ; CA ; 92093-0446 ; USA

关键词：Glycoside hydrolase ; Carbohydrate metabolism ; 3D structure ; Protein family ; Protein function prediction ; Domain of unknown function ; DUF

刊名：BMC Bioinformatics

出版年：2014

作者：Nourollah Ahmadi (1)
Alain Audebert (1)
Malcolm J Bennett (2)
Anthony Bishopp (2)
Antonio Costa de Oliveira (3)
Brigitte Courtois (1)
Abdala Diedhiou (4) (5)
Anne Di茅vart (1)
Pascal Gantet (6) (7)
Alain Ghesqui猫re (8)
Emmanuel Guiderdoni (1)
Amelia Henry (9)
Yoshiaki Inukai (10)
Leon Kochian (11)
Laurent Laplaze (5) (8)
Mikael Lucas (8)
Doan Trung Luu (12)
Baboucarr Manneh (13)
Xiaorong Mo (14)
Raveendran Muthurajan (15)
Christophe P茅rin (1)
Adam Price (16)
Sabariappan Robin (15)
Herv茅 Sentenac (12)
Bassirou Sine (17) (5)
Yusaku Uga (18)
Anne Ali茅nor V茅ry (12)
Matthias Wissuwa (19)
Ping Wu (14)
Jian Xu (20)

1. CIRAD ; UMR AGAP ; 34398 ; Montpellier Cedex 5 ; France
2. Centre for Plant Integrative Biology ; University of Nottingham ; Loughborough ; LE12 5RD ; UK
3. UFPel ; Plant Genomics and Breeding Center ; Pelotas ; Brazil
4. Universit茅 Cheikh Anta Diop (UCAD) ; D茅partement de Biologie V茅g茅tale ; Laboratoire Commun de Microbiologie IRD/ISRA/UCAD ; Centre de Recherche de Bel Air - BP 1386 CP 18524 ; Dakar ; S茅n茅gal
5. Laboratoire Mixte International Adaptation des Plantes et microorganismes associ茅s aux Stress Environnementaux (LAPSE) ; Centre de Recherche de Bel Air - BP 1386 CP 18524 ; Dakar ; S茅n茅gal
6. Universit茅 Montpellier 2 ; UMR DIADE ; Montpellier ; France
7. IRD ; LMI RICE ; USTH ; Agronomical Genetics Institute ; Hanoi ; Vietnam
8. IRD ; UMR DIADE ; Montpellier ; France
9. IRRI ; Los Ba帽os ; Philippines
10. International Cooperation Center for Agricultural Education (ICCAE) ; Nagoya University ; Furo-cho ; Chikusa ; Nagoya ; 464-8601 ; Japan
11. Robert W. Holley Center for Agriculture and Health ; USDA-ARS and Department of Plant Biology ; Cornell University ; Ithaca ; NY ; 14853 ; USA
12. Biochimie et Physiologie Mol茅culaire des Plantes ; Institut de Biologie Int茅grative des Plantes ; UMR 5004 CNRS/386 INRA/Montpellier SupAgro/Universit茅 Montpellier 2 ; F-34060 ; Montpellier Cedex 2 ; France
13. Africa Rice Center ; AfricaRice Sahel Regional Station ; B.P. 96 ; St Louis ; Senegal
14. State Key Laboratory of Plant Physiology and Biochemistry ; College of Life Science ; Zhejiang University ; Hangzhou ; 310058 ; China
15. Tamil Nadu Agricultural University ; 641003 ; Coimbatore ; India
16. University of Aberdeen ; Aberdeen ; AB24 3UU ; UK
17. ISRA ; CERAAS ; Thi猫s ; Senegal
18. National Institute of Agrobiological Sciences (NIAS) ; 2-1-2 Kannondai ; Tsukuba ; Ibaraki ; 305-8602 ; Japan
19. Japan International Research Center for Agricultural Sciences (JIRCAS) ; 1-1 Ohwashi ; Tsukuba ; 305-8686 ; Japan
20. Department of Biological Sciences and NUS Centre for BioImaging Sciences ; Faculty of Science ; National University of Singapore ; Singapore ; 117543 ; Singapore

关键词：Ideotype ; Breeding ; Phenotyping ; Genetic and molecular controls ; Rice ; Roots

刊名：Rice

出版年：2014

作者：Michael K Skinner (1)
Marina I Savenkova (1)
Bin Zhang (2)
Andrea C Gore (3)
David Crews (4)

1. Center for Reproductive Biology ; School of Biological Sciences ; Washington State University ; Pullman ; WA ; 99164-4236 ; USA
2. Department of Genetics & Genomic Sciences ; Institute of Genomics and Multiscale Biology ; Mount Sinai School of Medicine ; New York ; NY ; 10029 ; USA
3. Pharmacology and Toxicology ; Austin ; Texas
4. Section of Integrative Biology ; University of Texas at Austin ; Austin ; TX ; 78712 ; USA

关键词：Epigenetics ; Brain ; Networks ; Evolution ; Behavior

刊名：BMC Genomics

出版年：2014

作者：Zheng Zhao (1)
Yongsheng Li (1)
Hong Chen (1)
Jianping Lu (1)
Peter M Thompson (3)
Juan Chen (1)
Zishan Wang (1)
Juan Xu (1)
Chun Xu (2)
Xia Li (1)

1. College of Bioinformatics Science and Technology ; Harbin Medical University ; Harbin ; 150081 ; China
3. Southwest Brain Bank ; Department of Psychiatry ; UTHSCSA ; San Antonio ; TX ; USA
2. Department of Pediatrics ; Paul L. Foster School of Medicine ; Texas Tech University Health Science Center ; El Paso ; TX ; USA

关键词：Schizophrenia ; Bipolar disorder ; Next ; generation sequencing ; Epigenomic and transcriptomic data ; Brain ; Blood

刊名：BMC Medical Genomics

出版年：2014

作者：Dokyoon Kim (1)
Ruowang Li (1)
Scott M Dudek (1)
Alex T Frase (1)
Sarah A Pendergrass (1)
Marylyn D Ritchie (1)

1. Department of Biochemistry and Molecular Biology ; Center for Systems Genomics ; Pennsylvania State University ; University Park ; Pennsylvania ; USA

关键词：Knowledge ; driven genomic interaction ; Integrative analysis ; Grammatical evolution neural network ; Clinical outcome prediction ; Ovarian cancer

刊名：BioData Mining

出版年：2014