Estimation of linkage disequilibrium levels and haplotype block structure in Chinese Simmental and Wagyu beef cattle using high-density genotypes

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Estimation of linkage disequilibrium levels and haplotype block structure in Chinese Simmental and Wagyu beef cattle using high-density genotypes

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作者：Hong Niu¹ ; ^{nhnh0304@126.com" class="auth_mail" title="E-mail the corresponding author} ; Bo Zhu¹ ; ^{zhubo525@126.com" class="auth_mail" title="E-mail the corresponding author} ; Peng Guo ^{super_guopeng@163.com" class="auth_mail" title="E-mail the corresponding author} ; Wengang Zhang ^{zhangwengang_19@sina.com" class="auth_mail" title="E-mail the corresponding author} ; Jinglong Xue ^{542809778@qq.com" class="auth_mail" title="E-mail the corresponding author} ; Yan Chen ^{chenyan0204@163.com" class="auth_mail" title="E-mail the corresponding author} ; Lupei Zhang ^{lpzhang@iascaas.net.cn" class="auth_mail" title="E-mail the corresponding author} ; Huijiang Gao ^{gaohj111@sina.com" class="auth_mail" title="E-mail the corresponding author} ; Xue Gao ^{gaoxue76@126.com" class="auth_mail" title="E-mail the corresponding author} ; Lingyang Xu ; ^{xulingyang@163.com" class="auth_mail" title="E-mail the corresponding author} ; Junya Li ; ^{jl1@iascaas.net.cn" class="auth_mail" title="E-mail the corresponding author}
关键词：Linkage disequilibrium ; Haplotype blocks ; Chinese Simmental beef cattle ; Chinese Wagyu cattle ; HigH-density genotypes
刊名：Livestock Science
出版年：2016
出版时间：August 2016
年：2016
卷：190
期：Complete
页码：1-9
全文大小：1956 K

文摘

class="label">•: The average LD at the same genetic distance in Chinese Wagyu was higher than that in Simmental.
class="label">•: LD decayed more slowly on the X chromosome than autosomes in Simmental and Wagyu.
class="label">•: 50,475 haplotype blocks shared by two populations, 18,440 unique blocks in Chinese Simmental and 15,417 in Wagyu.
class="label">•: The r² dropped below 0.2 at distances of 34 kb and 40 kb in Chinese Simmental and Wagyu.

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