The taxonomic position and the unexpected divergence of the Habu viper, Protobothrops among Japanese subtropical islands

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The taxonomic position and the unexpected divergence of the Habu viper, Protobothrops among Japanese subtropical islands

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作者：Hiroki Shibata^a ; ^{hshibata@gen.kyushu-u.ac.jp" class="auth_mail" title="E-mail the corresponding author} ; Takahito Chijiwa^b ; Shosaku Hattori^c ; Koki Terada^d ; Motonori Ohno^b ; Yasuyuki Fukumaki^a
关键词：BIC ; Bayesian information criterion ; BP ; bootstrap probability ; GTR ; + ; G ; General Time Reversible model with Gamma-distributed rates ; HKY ; Hasegawa&ndash ; Kishino&ndash ; Yano model ; HKY ; + ; G ; Hasegawa&ndash ; Kishino&ndash ; Yano model with Gamma-distributed rates ; HKY ; + ; G ; + ; I ; Hasegawa&ndash ; Kishino&ndash ; Yano model with Gamma-distributed rates and invariant sites ; HPD ; highest posterior density ; MCMC ; Monte Carlo Markov Chain ; mtDNA ; mitochondrial DNA ; MY ; milli
刊名：Molecular Phylogenetics and Evolution
出版年：2016
出版时间：August 2016
年：2016
卷：101
期：Complete
页码：91-100
全文大小：1347 K

文摘

•: Determined the complete mtDNA sequence of 43 specimens of Protobothrops collected from 12 Japanese subtropical islands.
•: P. flavoviridis and P. tokarensis form a distinct species group in the phylogeny of 12 Protobothrops species.
•: Observed a significant genetic divergence of P. flavoviridis between the Amami Clade and the Okinawa Clade.
•: All specimen of P. tokarensis are included in the Amami Cluster, suggesting the paraphyly of P. flavoviridis.
•: The divergence time of the two clusters, 6.5 MYA, vastly precedes the geological vicariance of the islands, 1.5 MYA.

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