DNA barcodes were obtained for 651 earthworms from the Nouragues reserve (French Guiana).
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48 molecular species (MOTUs) were detected at the study site.
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We found more MOTUs in soil and decaying trunks than in epiphytic soils and sediments.
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We found an important turnover in MOTU composition between distant localities and among habitats.
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Community structure results from both historical and actual processes.
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