Genetic Differentiation in Response to Selection for Water-Soluble Carbohydrate Content in Perennial Ryegrass (Lolium perenne L.)
详细信息    查看全文
  • 作者:J. A. Gallagher (1)
    L. B. Turner (1)
    A. J. Cairns (1)
    M. Farrell (1)
    J. A. Lovatt (1)
    K. Sk酶t (1)
    I. P. Armstead (1)
    M. O. Humphreys (1)
    I. Roldan-Ruiz (2)

    1. Institute of Biological
    ; Environmental and Rural Sciences ; Aberystwyth University ; Gogerddan ; Aberystwyth ; Ceredigion ; SY23 3EE ; UK
    2. Growth and Development Group
    ; Plant Sciences Unit ; Institute for Agricultural and Fisheries Research (ILVO) ; Melle ; Belgium
  • 关键词:Allelic richness ; Biorefining ; Dry matter yield ; Fructan polymers ; SSR markers ; Sugars
  • 刊名:BioEnergy Research
  • 出版年:2015
  • 出版时间:March 2015
  • 年:2015
  • 卷:8
  • 期:1
  • 页码:77-90
  • 全文大小:847 KB
  • 参考文献:1. Turner LB, Cairns AJ, Armstead IP, Ashton J, Sk酶t K, Whittaker D, Humphreys MO (2006) Dissecting the regulation of fructan metabolism in perennial ryegrass ( / Lolium perenne) with quantitative trait locus mapping. New Phytol 169:45鈥?8 469-8137.2005.01575.x" target="_blank" title="It opens in new window">CrossRef
    2. Humphreys MO (1989) Water-soluble carbohydrates in perennial ryegrass breeding. II. Cultivar and hybrid progeny performance in cut plots. Grass Forage Sci 44:237鈥?44 494.1989.tb01932.x" target="_blank" title="It opens in new window">CrossRef
    3. Wilkins PW, Humphreys MO (2003) Progress in breeding forage grasses for temperate agriculture. J Agric Sci 140:129鈥?50 CrossRef
    4. Gallagher JA, Turner L, Cairns AJ (2007) Fructan in temperate forage grasses; Agronomy, physiology and molecular biology.In: Shiomi N, Benkeblia N, Onodera S, eds. Recent Advances in Fructoologosaccharides Research, Kerala, India: Research Signpost, pp15鈥?6
    5. Warwel S, Bruse F, Demes C, Kunz M, Klaas MR (2001) Polymers and surfactants on the basis of renewable resources. Chemosphere 43:39鈥?8 45-6535(00)00322-2" target="_blank" title="It opens in new window">CrossRef
    6. Vieira de Almeida M, Le Hyaric M (2005) Carbohydrate-derived surfactants. Mini-Rev Org Chem 2:283鈥?97 4/1570193054368873" target="_blank" title="It opens in new window">CrossRef
    7. Farrar K, Bryant DN, Turner L, Gallagher J, Thomas A, Farrell M, Humphreys MO, Donnison IS (2012) Breeding for bioethanol production in / Lolium perenne L.: Association of allelic variation with high water-soluble carbohydrate content. Bioenergy Res 5:149鈥?57 CrossRef
    8. Turner LB, Skot K, Farrell M, Cairns AJ, Armstead IP, Farrar K, Donnison IS, Humphreys MO (2009) Changes in SSR allele frequencies during phenotypic selection for water-soluble carbohydrate (WSC) in an experimental population of perennial ryegrass. In: L眉bberstedt, T. et al. (ed) Proceedings, 27th EUCARPIA Symposium on Improvement of Fodder Crops and Amenity Grasses, Copenhagen, 19鈥?3 August 2007. p. 27
    9. Humphreys MO (1989) Water-soluble carbohydrates in perennial ryegrass breeding. I. Genetic differences among cultivars and hybrid progeny grown as spaced plants. Grass Forage Sci 44:231鈥?36 494.1989.tb01931.x" target="_blank" title="It opens in new window">CrossRef
    10. Posselt UK, Barre P, Brazauskas G, Turner LB (2006) Comparative analysis of genetic similarity between perennial ryegrass genotypes investigated with AFLPs, ISSRs, RAPDs and SSRs. Czech J Genet Plant Breed 42:87鈥?4
    11. Payne RW, Harding SA, Murray DM, Soutar DM, Baird DB, Glaser AI, Channing IC, Welham SJ, Gilmour AR, Thompson R, Webster R (2010) GenStat庐 for Windows庐 13th Edition, Introduction. VSN International, Hemel Hempstead
    12. Gill GP, Wilcox PL, Whittaker DJ, Winz RA, Bickerstaff P, Echt CE, Kent J, Humphreys MO, Elborough KM, Gardner RC (2006) A framework linkage map of perennial ryegrass based on SSR markers. Genome 49:354鈥?64 CrossRef
    13. Goudet, J (2001) FSTAT, a program to estimate and test gene diversities and fixation indices (version 2.9.3). http://www2.unil.ch/popgen/softwares/fstat.htm.
    14. Raymond M, Rousset F (1995) GENEPOP (version 1.2): population genetics software for exact tests and ecumenicism. J Hered 86:248鈥?49
    15. Rousset F (2008) Genepop鈥?07: a complete reimplementation of the Genepop software for Windows and Linux. Mol Ecol Resour 8:103鈥?06 471-8286.2007.01931.x" target="_blank" title="It opens in new window">CrossRef
    16. Beaumont MA, Nichols RA (1996) Evaluating loci for use in the genetic analysis of population structure. Proc R Soc Lond B 263:1619鈥?626 CrossRef
    17. Antao T, Lopes A, Lopes RJ, Beja-Pereira A, Luikart G (2008) LOSITAN: a workbench to detect molecular adaptation based on a FST-outlier method. BMC Bioinformatics 9:323 471-2105-9-323" target="_blank" title="It opens in new window">CrossRef
    18. Fu Y-B, Somers DJ (2011) Allelic changes in bread wheat cultivars were associated with long-term wheat trait improvements. Euphytica 179:209鈥?25 CrossRef
    19. Falke KC, Flachenecker AE, Melchinger AE, Piepho H-P, Maurer HP, Frisch M (2007) Temporal changes in allele frequencies in two European F2 flint maize populations under modified recurrent full-sib selection. Theor Appl Genet 114:765鈥?76 443-7" target="_blank" title="It opens in new window">CrossRef
    20. Hayes BJ, Cogan NOI, Pembleton LW, Goddard ME, Wang J, Spangenberg GC, Forster JW (2013) Prospects for genomic selection in forage plant species. Plant Breed 132:133鈥?43 CrossRef
    21. Auzanneau J, Huyghe C, Julier B, Barre P (2007) Linkage disequilibrium in synthetic varieties of perennial ryegrass. Theor Appl Genet 115:837鈥?47 CrossRef
    22. Brazauskas G, Lenk I, Pedersen MG, Studer B, Lubberstedt T (2011) Genetic variation, population structure and linkage disequilibrium in European elite germplasm of perennial ryegrass. Plant Sci 181:412鈥?20 CrossRef
    23. Cogan NOI, Smith KF, Yamada T, Francki MG, Vecchies AC, Jones ES, Spangenberg GC, Forster JW (2005) QTL analysis and comparative genomics of herbage quality traits in perennial ryegrass ( / Lolium perenne L.). Theor Appl Genet 110:364鈥?80 4-1848-9" target="_blank" title="It opens in new window">CrossRef
    24. Yamada T, Jones ES, Cogan NOI, Vecchies AC, Nomura T, Hisano H, Shimamoto Y, Smith KF, Hayward MD, Forster JW (2004) QTL analysis of morphological, developmental, and winter hardiness-associated traits in perennial ryegrass. Crop Sci 44:925鈥?93 4.0925" target="_blank" title="It opens in new window">CrossRef
    25. Sartie AM, Matthew C, Easton HS, Faville MJ (2011) Phenotypic and QTL analyses of herbage production-related traits in perennial ryegrass ( / Lolium perenne L.). Euphytica 182(315):315鈥?15
    26. Kobayashi S, Humphreys MO, Tase K, Sanada Y, Yamada T (2011) Molecular marker dissection of ryegrass plant development and its response to growth environments and foliage cuts. Crop Sci 51:600鈥?11 CrossRef
    27. Khaembah EN, Irving LJ, Thom ER, Faville MJ, Easton HS, Matthew C (2013) Leaf Rubisco turnover in a perennial ryegrass ( / Lolium perenne L.) mapping population: genetic variation, identification of associated QTL, and correlation with plant morphology and yield. J Exp Bot 64:1305鈥?316 4" target="_blank" title="It opens in new window">CrossRef
    28. Turner LB, Farrell M, Humphreys MO, Dolstra O (2010) Testing water-soluble carbohydrate QTL effects in perennial ryegrass ( / Lolium perenne L.) by marker selection. Theor Appl Genet 121:1405鈥?417 CrossRef
    29. Dolstra O, Denneboom C, de Vos ALF, van Loo EN (2007) Marker-assisted selection for improving quantitative traits of forage crops. In: Guimar茫es EP, Ruane J, Scherf BD, Sonnino A, Dargie JD (eds) Marker-assisted selection: current status and future perspectives in crops, livestock, forestry and fish. FAO, Rome, pp 59鈥?5
  • 刊物类别:Chemistry and Materials Science
  • 刊物主题:Chemistry
    Biomaterials
    Biochemical Engineering
    Bioorganic Chemistry
  • 出版者:Springer New York
  • ISSN:1939-1242
文摘
Plant carbohydrates are of increasing interest as renewable feedstocks to replace petrochemicals in the generation of fuels and production of high-value chemicals. Greater understanding of the genetic control of diversity in fructan synthesis and accumulation would facilitate more directed channelling of feedstock to process in a ryegrass biorefinery. Divergent populations produced by phenotypic selection for water-soluble carbohydrate content have been used to investigate relationships between traits, and to identify patterns of genetic differentiation which indicate genomic regions under high and low selection pressure. Selection for high water-soluble carbohydrate content was associated with increased synthesis of large fructan polymers and increased accumulation of above-ground plant biomass, particularly during spring. Three rounds of selection and two rounds of recombination resulted in widespread genetic differentiation across the whole genome, causing reduced allelic richness and increasing homozygosity at some loci. A smaller number of loci were shown to be subject to high selection pressure. Breeding material subjected to many years of selection for water-soluble carbohydrate also showed allelic differences which may reflect the consequences of high selection pressure at some of these same loci. However, some of the loci unaffected in the divergent selection experiment showed similar effects. This might arise from differences in linkage disequilibrium in these two sets of plant materials, but more likely from the different genetic background of the germplasm. This illustrates the complex nature of the water-soluble carbohydrate trait in perennial ryegrass.
NGLC 2004-2010.National Geological Library of China All Rights Reserved.
Add:29 Xueyuan Rd,Haidian District,Beijing,PRC. Mail Add: 8324 mailbox 100083
For exchange or info please contact us via email.