The dual role of phytoene synthase genes in carotenogenesis in carrot roots and leaves
详细信息    查看全文
  • 作者:Hui Wang (1)
    Cheng-Gang Ou (1)
    Fei-Yun Zhuang (1)
    Zhen-Guo Ma (1)
  • 关键词:Carrot ; Backcross inbred lines (BILs) ; Phytoene synthase gene ; Carotenoids accumulation ; De ; etiolation
  • 刊名:Molecular Breeding
  • 出版年:2014
  • 出版时间:December 2014
  • 年:2014
  • 卷:34
  • 期:4
  • 页码:2065-2079
  • 全文大小:776 KB
  • 参考文献:1. Aluru M, Xu Y, Guo R, Wang ZG, Li SS, White W, Wang K, Rodermel S (2008) Generation of transgenic maize with enhanced provitamin A content. J Exp Bot 59:3551鈥?562 CrossRef
    2. Arango J, Jourdan M, Geoffriau E, Beyer P, Welsch R (2014) Carotene hydroxylase activity determines the levels of both 伪-carotene and total carotenoids in orange carrots. Plant Cell 26. doi:10.1105/tpc.113.122127
    3. Banga O (1957) The development of the original European carrot material. Euphytica 6:64鈥?6
    4. Bowman MJ, Willis DK, Simon PW (2014) Transcript abundance of phytoene synthase 1 and phytoene synthase 2 is associated with natural variation of storage root carotenoid pigmentation in carrot. J Am Soc Hortic Sci 139:63鈥?8
    5. Briard M, Le Clerc V, Grzebelus D, Senalik D, Simon PW (2000) Modified protocols for rapid carrot genomic DNA extraction and AFLP鈩?analysis using silver stain or radioisotopes. Plant Mol Biol Rep 18:235鈥?41
    6. Britton G (1993) Carotenoids in chloroplasts pigment-protein complexes. In: Sundqvist C, Ryberg M (eds) Pigment鈥損rotein complexes in plastids: synthesis and assembly. Academic Press, San Diego, pp 447鈥?83
    7. Buishand JG, Gabelman WH (1979) Investigations on the inheritance of color and carotenoid content in phloem and xylem of carrot roots ( / Daucus carota L.). Euphytica 28:611鈥?32
    8. Cavagnaro PF, Chung SM, Manin S, Yildiz M, Ali A, Alessandro MS, Iorizzo M, Senalik DA, Simon PW (2011) Microsatellite isolation and marker development in carrot鈥攇enomic distribution, linkage mapping, genetic diversity analysis and marker transferability across Apiaceae. BMC Genomics 12:386鈥?05
    9. Cazzonelli CI, Pogson B (2010) Source to sink: regulation of carotenoid biosynthesis in plants. Trends Plant Sci 15:266鈥?74
    10. Clotault J, Peltier D, Berruyer R, Thomas M, Briard M, Geoffriau E (2008) Expression of carotenoid biosynthesis genes during carrot root development. J Exp Bot 59:3563鈥?573
    11. Clotault J, Peltier D, Soufflet-Freslon V, Briard M, Geoffriau E (2012) Differential selection on carotenoid biosynthesis genes as a function of gene position in the metabolic pathway: a study on the carrot and dicots. PLoS One 7:e38724
    12. Daraselia ND, Tarchevskaya S, Narita JO, Daraselia ND, Narita JO (1996) The promoter for tomato 3-hydroxy-3-methylglutaryl coenzyme A reductase gene 2 has unusual regulatory elements that direct high-level expression. Plant Physiol 112:727鈥?33
    13. Diretto G, Al-Babili S, Tavazza R, Scossa F, Papacchioli V, Migliore M, Beyer P, Giuliano G (2010) Transcriptional-metabolic networks in beta-carotene-enriched potato tubers: the long and winding road to the golden phenotype. Plant Physiol 154:899鈥?12
    14. Dun EA, Brewer PB, Beveridge CA (2009) Strigolactones: discovery of the elusive shoot branching hormone. Trends Plant Sci 14:364鈥?72
    15. Fraser PD, Romer S, Shipton CA, Mills PB, Kiano JW, Misawa N, Drake RG, Schuch W, Bramely PM (2002) Evaluation of transgenic tomato plants expressing an additional phytoene synthase in a fruit-specific manner. Proc Natl Acad Sci USA 99:1092鈥?097
    16. Fuentes P, Pizarro L, Moreno JC, Handford M, Rodriguez-Concepcion M, Stange C (2012) Light-dependent changes in plastid differentiation influence carotenoid gene expression and accumulation in carrot roots. Plant Mol Biol 79:47鈥?9
    17. Gady AL, Vriezen WH, Van de Wal MHBJ, Huang PP, Bovy AG, Visser RGF, Bachem CWB (2012) Induced point mutations in the phytoene synthase 1 gene cause differences in carotenoid content during tomato fruit ripening. Mol Breed 29:801鈥?12
    18. Gallagher CE, Matthews PD, Li F, Wurtzel ET (2004) Gene duplication in the carotenoid biosynthetic pathway preceded evolution of the grasses. Plant Physiol 135:1776鈥?783
    19. Giorio G, Stigliani AL, D鈥橝mbrosio C (2008) Phytoene synthase genes in tomato ( / Solanum lycopersicum L.)鈥攏ew data on the structures, the deduced amino acid sequences and the expression patterns. FEBS J 275:527鈥?35
    20. Goldman IL, Breitbach DN (1996) Inheritance of a recessive character controlling reduced carotenoid pigmentation in carrot ( / Daucus carota L.). J Hered 87:380鈥?82
    21. Hayward A, Stirnberg P, Beveridge C, Leyser O (2009) Interactions between auxin and strigolactone in shoot branching control. Plant Physiol 15:400鈥?12
    22. Hirschberg J (2001) Carotenoid biosynthesis in flowering plants. Curr Opin Plant Biol 4:210鈥?18
    23. Iorizzo M, Senalik DA, Ellison SL, Grzebelus D, Cavagnaro PF, Allender C, Brunet J, Spooner DM, Deynze AV, Simon PW (2013) Genetic structure and domestication of carrot ( / Daucus carota subsp. / sativus) (Apiaceae). Am J Bot 100:930鈥?38
    24. Just BJ, Santos CAF, Fonseca MEN, Boiteux LS, Oloizia BB, Simon PW (2007) Carotenoid biosynthesis structural genes in carrot ( / Daucus carota): isolation, sequence-characterization, single nucleotide polymorphism (SNP) markers and genome mapping. Theor Appl Genet 114:693鈥?04
    25. Just BJ, Santos CAF, Yandell BS, Simon PW (2009) Major QTL for carrot color are positionally associated with carotenoid biosynthetic genes and interact epistatically in a domesticated聽脳聽wild carrot cross. Theor Appl Genet 119:1155鈥?169
    26. Kato M, Ikoma Y, Matsumoto H, Sugiura M, Hyodo H, Yano M (2004) Accumulation of carotenoids and expression of carotenoid biosynthetic genes during maturation in citrus fruit. Plant Physiol 134:824鈥?37
    27. Lescot M, D茅hais P, Thijs G, Marchal K, Moreau Y, Van de Peer Y, Rouz茅 P, Rombauts S (2002) PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences. Nucleic Acids Res 30:325鈥?27
    28. Li FQ, Vallabhaneni R, Yu J, Rocheford T, Wurtzel ET (2008) The maize phytoene synthase gene family: overlapping roles for carotenogenesis in endosperm, photomorphogenesis, and the thermal stress tolerance. Plant Physiol 147:1334鈥?346
    29. Li F, Tsfadia O, Wurtzel ET (2009) The phytoene synthase gene family in the grasses: subfunctionalization provides tissue-specific control of carotenogenesis. Plant Signal Behav 4:208鈥?11
    30. Livak K, Schmittgen T (2001) Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) method. Methods 25:402鈥?08
    31. Maass D, Arango J, Wust F, Beyer P, Welsch R (2009) Carotenoid crystal formation in Arabidopsis and carrot roots caused by increased phytoene synthase protein levels. PLoS One 4:e6373
    32. Martin C, Ellis N, Rook F (2010) Do transcription factors play special roles in adaptive variation? Plant Physiol 154:506鈥?11
    33. Nambara E, Marion-Poll A (2005) Abscisic acid biosynthesis and catabolism. Annu Rev Plant Biol 56:165鈥?85
    34. Nicolle C, Simon G, Rock E, Amouroux P, Remesy C (2004) Genetic variability influences carotenoid, vitamin, phenolic, and mineral content in white, yellow, purple, orange, and dark-orange carrot cultivars. J Am Soc Hortic Sci 129:523鈥?29
    35. Niyogi KK, Bjorkman O, Grossman AR (1997) The roles of specific xanthophylls in photoprotection. Proc Natl Acad Sci USA 94:14162鈥?4167
    36. Prince VE, Pickett FB (2002) Splitting pairs: the diverging fates of duplicated genes. Nat Rev Genet 3:827鈥?37
    37. Qin XQ, Coku A, Inoue K, Tian L (2011) Expression, subcellular localization, and cis-regulatory structure of duplicated phytoene synthase genes in melon ( / Cucumis melo L.). Planta 234:737鈥?48
    38. Rao A, Rao L (2007) Carotenoids and human health. Pharmacol Res 55:207鈥?16
    39. Rodr铆guez-Villal贸n A, Gas E, Rodr铆guez-Concepci贸n M (2009) Phytoene synthase activity controls the biosynthesis of carotenoids and the supply of their metabolic precursors in dark-grown Arabidopsis seedlings. Plant J 60:424鈥?35
    40. Ruiz-Solaa M脕, Rodr铆guez-Concepci贸n M (2012) Carotenoid biosynthesis in Arabidopsis: a colorful pathway. The Arabidopsis Book 10:e0158. doi:10.1199/tab.0158
    41. Santos CAF, Senalik D, Simon PW (2005) Path analysis suggests phytoene accumulation is the key step limiting the carotenoid pathway in white carrot roots. Genet Mol Biol 28:287鈥?93
    42. Shewmaker CK, Sheehy JA, Daley M, Colburn S, Ke DY (1999) Seed-specific overexpression of phytoene synthase: increase in carotenoids and other metabolic effects. Plant J 20:401鈥?12
    43. Shumskaya M, Bradbury LMT, Monaco RR, Wurtzel ET (2012) Plastid localization of the key carotenoid enzyme phytoene synthase is altered by isozyme, allelic variation and activity. Plant Cell 24:3725鈥?741
    44. Simon PW (1997) Plant pigments for color and nutrition. HortScience 32:12鈥?3
    45. Simon PW (2000) Domestication, historical development, and modern breeding of carrot. Plant Breed Rev 19:157鈥?90
    46. Stange C, Fuentes P, Handford M, Pizarro L (2008) / Daucus carota as a novel model to evaluate the effect of light on carotenogenic gene expression. Biol Res 41:289鈥?01
    47. Stolarczyk J, Janick J (2011) Carrot: history and iconography. Chron Hortic 51:13鈥?8
    48. Sun TP, Kamiya Y (1994) The Arabidopsis GAl locus encodes the cyclase ent-kaurene synthetase A of gibberellin biosynthesis. Plant Cell 6:1509鈥?518
    49. Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28:2731鈥?739
    50. Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673鈥?680
    51. Toledo-Ortiz G, Huq E, Rodr铆guez-Concepci贸n M (2010) Direct regulation of phytoene synthase gene expression and carotenoid biosynthesis by phytochrome-interacting factors. Proc Natl Acad Sci USA 107:11626鈥?1631
    52. Umehara M, Hanada A, Yoshida S, Akiyama K, Arite T, Takeda-Kamiya N, Magome H, Kamiya Y, Shirasu K, Yoneyama K, Kyozuka J, Yamaguchi S (2008) Inhibition of shoot branching by new terpenoid plant hormones. Nature 455:195鈥?00
    53. Umiel N, Gabelman WH (1972) Inheritance of root color and carotenoid synthesis in carrot, / Daucus carota L.: orange vs. red. J Am Soc Hortic Sci 97:453鈥?60
    54. Welsch R, W眉st F, B盲r C, Al-Babili S, Beyer P (2008) A third phytoene synthase is devoted to abiotic stress-induced abscisic acid formation in rice and defines functional diversification of phytoene synthase genes. Plant Physiol 147:367鈥?80
    55. Welsch R, Arango J, Bar C, Bertha S, Al-Babili S, Beltran J, Chavarriaga P, Ceballos H, Tohme J, Beyer P (2010) Provitamin A accumulation in cassava ( / Manihot esculenta) roots driven by a single nucleotide polymorphism in a phytoene synthase gene. Plant Cell 22:3348鈥?356
    56. Yamaguchi-Shinozaki K, Shinozaki K (1993) Arabidopsis DNA encoding two desiccation-responsive rd29 genes. Plant Physiol 101:1119鈥?120
    57. Ye XD, Babilli SA, Kloti A, Zhang J, Lucca P, Beyer P, Potrykus I (2000) Engineering the provitamin A (尾-carotene) biosynthetic pathway into (carotenoid-free) rice endosperm. Science 287:303鈥?05
    58. Zagon J, Jansen B, Knoppik M, Ehlers A, Kroh LW, Holzhauser T, Vieths S, Broll H (2010) Gene transcription analysis of carrot allergens by relative quantification with single and duplex reverse transcription real-time PCR. Anal Bioanal Chem 396:483鈥?93
    59. Zhu CF, Naqvi S, Breitenbach J, Sandmann G, Christou P, Capell T (2008) Combinatorial genetic transformation generates a library of metabolic phenotypes for the carotenoid pathway in maize. Proc Natl Acad Sci USA 105:18232鈥?8237
  • 作者单位:Hui Wang (1)
    Cheng-Gang Ou (1)
    Fei-Yun Zhuang (1)
    Zhen-Guo Ma (1)

    1. Key Laboratory of Horticultural Crop Biology and Germplasm Innovation, Ministry of Agriculture, Institute of Vegetables and Flowers, Chinese Academy of Agricultural Science, No. 12 Nanda Street, Zhongguan Cun, Haidian District, Beijing, 100081, China
  • ISSN:1572-9788
文摘
Carrot (Daucus carota L.) is an important food crop and is useful for studying carotenogenesis due to the quantity and diversity of carotenoids in its roots. Phytoene synthase catalyzes the first committed step in the carotenoid biosynthesis pathway, and its overexpression is the main driving force in the orange phenotype. At present, we lack fundamental knowledge of the role of these genes and their effects on carotenoid accumulation in leaves. In the present study, three backcross inbred lines (BC2S4) with different colored roots derived from a cross between the orange inbred line (Af) and related wild species were used to investigate the role of the duplicated DcPSY genes in root carotenogenesis. Promoter analysis showed that DcPSY genes have diverged substantially in their regulatory sequences after gene duplication. Expression levels of DcPSY1 and DcPSY2 were generally positively correlated with carotenoid content during root development. In mature leaves, total carotenoid content was higher than that in the roots, DcPSY1 expression increased extremely higher than DcPSY2 expression compared with roots, and DcPSY1 was more sensitive than DcPSY2 during leaf de-etiolation under sunlight. These results suggest that DcPSY1 seems to make an important contribution to carotenoid accumulation in the leaves and is important for photosynthesis and photoprotection, but they are not the determining factors of root color. This expands our understanding of the regulation of carotenoid biosynthesis in carrot.
NGLC 2004-2010.National Geological Library of China All Rights Reserved.
Add:29 Xueyuan Rd,Haidian District,Beijing,PRC. Mail Add: 8324 mailbox 100083
For exchange or info please contact us via email.