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在“NATURE电子期刊”中，命中：5,340条，耗时：0.0190239 秒

1.Transcriptome-wide interrogation of RNA secondary structure in living cells with icSHAPE

作者：Ryan A Flynn ; Qiangfeng Cliff Zhang ; Robert C Spitale ; Byron Lee ; Maxwell R Mumbach ; Howard Y Chang

关键词：RNA sequencing ; RNA folding ; Transcriptomics ; Structural biology

刊名：Nature Protocols

出版年：2016

2.Using single nuclei for RNA-seq to capture the transcriptome of postmortem neurons

作者：Suguna Rani Krishnaswami ; Rashel V Grindberg ; Mark Novotny ; Pratap Venepally ; Benjamin Lacar ; Kunal Bhutani ; Sara B Linker ; Son Pham ; Jennifer A Erwin ; Jeremy A Miller ; Rebecca Hodge ; James K McCarthy ; Martin Kelder ; Jamison McCorrison ; Brian D Aevermann ; Francisco Diez Fuertes ; Richard H Scheuermann ; Jun Lee ; Ed S Lein ; Nicholas Schork ; Michael J McConnell ; Fred H Gage ; Roger S Lasken

关键词：Molecular neuroscience ; Gene expression profiling ; RNA sequencing ; Transcriptomics

刊名：Nature Protocols

出版年：2016

3.Cell-type-specific profiling of protein–DNA interactions without cell isolation using targeted DamID with next-generation sequencing

作者：Owen J Marshall ; Tony D Southall ; Seth W Cheetham ; Andrea H Brand

关键词：DNA-binding proteins ; Gene expression profiling ; Transcriptomics ; Chromatin

刊名：Nature Protocols

出版年：2016

4.Genome-wide profiling of RNA polymerase transcription at nucleotide resolution in human cells with native elongating transcript sequencing

作者：Andreas Mayer ; L Stirling Churchman

关键词：Gene expression analysis ; RNA sequencing ; Transcription ; Transcriptomics

刊名：Nature Protocols

出版年：2016

5.A highly multiplexed and sensitive RNA-seq protocol for simultaneous analysis of host and pathogen transcriptomes

作者：Roi Avraham ; Nathan Haseley ; Amy Fan ; Zohar Bloom-Ackermann ; Jonathan Livny ; Deborah T Hung

关键词：RNA sequencing ; Transcriptomics ; Gene expression analysis ; Pathogens

刊名：Nature Protocols

出版年：2016

6.Mammalian NET-seq analysis defines nascent RNA profiles and associated RNA processing genome-wide

作者：Takayuki Nojima ; Tomá ; s Gomes ; Maria Carmo-Fonseca ; Nicholas J Proudfoot

关键词：RNA sequencing ; RNA splicing ; Transcriptomics ; Transcription

刊名：Nature Protocols

出版年：2016

7.Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown

作者：Mihaela Pertea ; Daehwan Kim ; Geo M Pertea ; Jeffrey T Leek ; Steven L Salzberg

关键词：Gene expression analysis ; RNA sequencing ; Transcriptomics ; Software

刊名：Nature Protocols

出版年：2016

8.Base-pair-resolution genome-wide mapping of active RNA polymerases using precision nuclear run-on (PRO-seq)

作者：Dig Bijay Mahat ; Hojoong Kwak ; Gregory T Booth ; Iris H Jonkers ; Charles G Danko ; Ravi K Patel ; Colin T Waters ; Katie Munson ; Leighton J Core ; John T Lis

关键词：RNA sequencing ; Transcriptional regulatory elements ; Gene expression analysis ; Transcriptomics

刊名：Nature Protocols

出版年：2016

9.Digital PCR to assess gene-editing frequencies (GEF-dPCR) mediated by designer nucleases

作者：Ulrike Mock ; Ilona Hauber ; Boris Fehse

关键词：RNA sequencing ; RNA splicing ; Transcriptomics ; Transcription

刊名：Nature Protocols

出版年：2016

10.Isolation of the protein and RNA content of active sites of transcription from mammalian cells

作者：Svitlana Melnik ; Maï ; wen Caudron-Herger ; Lilija Brant ; Ian M Carr ; Karsten Rippe ; Peter R Cook ; Argyris Papantonis

关键词：Transcription ; Transcriptomics ; Proteomics ; Genome-wide analysis of gene expression

刊名：Nature Protocols

出版年：2016

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